Structure of PDB 5xk9 Chain D

Receptor sequence
>5xk9D (length=209) Species: 1136432 (Streptomyces sp. CNH189) [Search protein sequence]
MTNLMLLPDGMRRWSQKQGISLDDSYAAMTDKLVEFTGWAREEGFTTFYV
TVSSVANYSRSEEQVTTAMNAFTEVVRRCHDTLNFNYSGTLEVVPERWLT
ELEALRAKSDSQSDFTLHFIMGMSLAHEVIGIFNKFNGKIPALTEELLAA
NAYVPEPVDFLIRPGGHVRMSSFYPLMSPFAEMYFCPTLLNDMTRADFDV
ALEDLRERD
3D structure
PDB5xk9 Head-to-Middle" and "Head-to-Tail" cis-Prenyl Transferases: Structure of Isosesquilavandulyl Diphosphate Synthase.
ChainD
Resolution2.137 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 GST D D9 G10 M11 R12 R13 Y26 V52 S53 N57 Y58 R60 A68 F72 D9 G10 M11 R12 R13 Y26 V52 S53 N57 Y58 R60 A68 F72
BS02 DMA D L7 P8 D9 T51 V52 R169 S171 F173 L7 P8 D9 T51 V52 R169 S171 F173
Gene Ontology
Molecular Function
GO:0002094 polyprenyltransferase activity
GO:0016740 transferase activity
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0046872 metal ion binding
Biological Process
GO:0016094 polyprenol biosynthetic process

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Molecular Function

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Biological Process
External links
PDB RCSB:5xk9, PDBe:5xk9, PDBj:5xk9
PDBsum5xk9
PubMed29215779
UniProtM4T4U9

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