Structure of PDB 5wql Chain D

Receptor sequence
>5wqlD (length=647) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
DITRADQIPVLKEETQHATVSERVTSRFTRSHYRQFDLDQAFSAKIFDRY
LNLLDYSHNVLLASDVEQFAKKKTELGDELRSGKLDVFYDLYNLAQKRRF
ERYQYALSVLEKPMDFTGNDTYNLDRSKAPWPKNEAELNALWDSKVKFDE
LSLKLTGKTDKEIRETLTRRYKFAIRRLAQTNSEDVFSLAMTAFAREIDP
HTNYLSPRNTEQFNTEMSLSLEGIGAVLQMDDDYTVINSMVAGGPAAKSK
AISVGDKIVGVGQTGKPMVDVIGWRLDDVVALIKGPKGSKVRLEILPAGK
GTKTRTVTLTRERIRLEDRAVKMSVKTVGKEKVGVLDIPGFYVGLTDDVK
VQLQKLEKQNVSSVIIDLRSNGGGALTEAVSLSGLFIPAGPIVQVRDNNG
KVREDSDTQVFYKGPLVVLVDRFSASASEIFAAAMQDYGRALVVGEPTFG
AGTVQQYRSLNRIYDQMLRPEWPALGSVQYTIQKFYRVNGGSTQRKGVTP
DIIMPTGNEETETGEKFEDNALPWDSIDAATYVKSGDLTAFEPELLKEHN
ARIAKDPEFQNIMKDIARFNAMKDKRNIVSLNYAVREKENNEDDATRLAR
LNERFKREGKPELKKLDDLPKDYQEPDPYLDETVNIALDLAKLEKAR
3D structure
PDB5wql Structural basis of adaptor-mediated protein degradation by the tail-specific PDZ-protease Prc
ChainD
Resolution2.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.4.21.102: C-terminal processing peptidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide D G396 G397 G398 L400 S452 A453 Q481 Y483 G372 G373 G374 L376 S426 A427 Q455 Y457
BS02 peptide D G247 I248 G249 A250 V251 L252 I307 K308 G223 I224 G225 A226 V227 L228 I283 K284
Gene Ontology
Molecular Function
GO:0008236 serine-type peptidase activity
Biological Process
GO:0006508 proteolysis

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Molecular Function
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Biological Process
External links
PDB RCSB:5wql, PDBe:5wql, PDBj:5wql
PDBsum5wql
PubMed29138488
UniProtP23865|PRC_ECOLI Tail-specific protease (Gene Name=prc)

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