Structure of PDB 5vsv Chain D

Receptor sequence
>5vsvD (length=341) Species: 1502 (Clostridium perfringens) [Search protein sequence]
LKTAYTFDDVLLVPNKSEVLPNEVSLKTQLTKKIQLNIPLMSASMDTVTE
SKMAIAMAREGGIGIIHKNMTIEDQAREVDRVKRSGGLLCGASIGVTNDM
MERVDAVVKAKVDVIVLDTAHGHSKGVIEGVKRIKAKYPELQVIAGNIAT
PEAVRDLAEAGADCVKVGIGPGSICTTRIVAGVGVPQLTAVMDCAEEGKK
LGIPVIADGGLKYSGDIVKALAAGACAAMMGSIFAGCEEAPGAIEIYQGR
SYKVYRGMGSLGAMAKKFVPEGVEGRIAYKGHLADTIYQLIGGIKSGMGY
LGAPTLENLYENANFVVQTSAGFRESHPHDINITKEAPNYS
3D structure
PDB5vsv Crystal Structure of Inosine 5'-monophosphate Dehydrogenase from Clostridium perfringens Complexed with IMP and P225
ChainD
Resolution2.205 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.1.1.205: IMP dehydrogenase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 8KY D A248 H249 M386 G387 M392 E411 A120 H121 M258 G259 M264 E271
BS02 8KY D P25 Y440 P21 Y300
BS03 IMP D M49 G300 S301 I302 C303 D336 G338 S360 Y383 G385 M386 G387 E411 M45 G172 S173 I174 C175 D208 G210 S232 Y255 G257 M258 G259 E271
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0003938 IMP dehydrogenase activity
GO:0016491 oxidoreductase activity
Biological Process
GO:0006164 purine nucleotide biosynthetic process

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Molecular Function
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Biological Process
External links
PDB RCSB:5vsv, PDBe:5vsv, PDBj:5vsv
PDBsum5vsv
PubMed
UniProtA0A127ELD1

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