Structure of PDB 5vj1 Chain D

Receptor sequence
>5vj1D (length=276) Species: 287 (Pseudomonas aeruginosa) [Search protein sequence]
DVARLLALRSFTELGARQRARALLDAGSFRELLDPFAGVQSPWLERQGIV
PQADDGVVVARGLLDGQPAVLAAIEGAFQGGSLGEVSGAKIAGALELAAE
DNRNGVPTRALLLLETGGVRLQEANLGLAAIAEIQAAIVDLQRYQPVVAV
IAGPVGCFGGMSIAAGLCSYVLVTREARLGLNGPQVIEQEAGIAEYDSRD
RPFIWSLTGGEQRFASGLADAYLADDLDEVRTSVLAYFAKGLPARPRCRR
AEDYLRRLGDLDTAEQPDAAGVRRLY
3D structure
PDB5vj1 Crystal structure of a Pseudomonas malonate decarboxylase holoenzyme hetero-tetramer.
ChainD
Resolution2.995 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) R145 Y146
Catalytic site (residue number reindexed from 1) R143 Y144
Enzyme Commision number 2.1.3.1: methylmalonyl-CoA carboxytransferase.
2.1.3.10: malonyl-S-ACP:biotin-protein carboxyltransferase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 COA D Q81 G82 S84 G119 V121 F160 R180 G185 Q79 G80 S82 G117 V119 F158 R178 G183
Gene Ontology
Molecular Function
GO:0003989 acetyl-CoA carboxylase activity
GO:0016740 transferase activity
GO:0016831 carboxy-lyase activity
Biological Process
GO:0005975 carbohydrate metabolic process
GO:0006633 fatty acid biosynthetic process
GO:2001295 malonyl-CoA biosynthetic process

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Molecular Function
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Biological Process
External links
PDB RCSB:5vj1, PDBe:5vj1, PDBj:5vj1
PDBsum5vj1
PubMed28757619
UniProtQ9I6S7

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