Structure of PDB 5uqg Chain D

Receptor sequence
>5uqgD (length=351) Species: 32022 (Campylobacter jejuni subsp. jejuni) [Search protein sequence]
AMKIVKRALTFEDVLLRPGYSEVLPKEVKIHTKLTKNITLNMPLISAAMD
TVTEHRAAIMMARLGGLGVIHKNMDIASQVREVKRVKKSESPDANKDNFG
RLRVGAAIGVGQMDRVDALVEAGVDVVVLDSAHGHSKGIIDTVKAIKAKY
PNLDLIAGNIATAAAAKALCEAGVDAVKVGIGPGSICTTRIVSGVGVPQI
SAIDECVEEANKFGVPVIADGGIKYSGDIAKALAVGASSVMIGSLLAGTD
ESPGELFTYQGRQYKSYRGMGSLGAMQLVPEGIEGRVPYVGSIRSVVHQL
LGGLRSSMGYVGAKDIEDFQKRAEFVEITTAGLKESHVHDVTITHEAPNY
K
3D structure
PDB5uqg Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase from Campylobacter jejuni in the complex with inhibitor p200
ChainD
Resolution2.03 Å
3D
structure
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Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 IMP D M48 G298 S299 I300 C301 D334 G336 G357 S358 Y381 G383 M384 G385 E411 M49 G184 S185 I186 C187 D220 G222 G243 S244 Y267 G269 M270 G271 E281
BS02 8L4 D A246 M384 G385 M390 E411 A132 M270 G271 M276 E281
BS03 8L4 D P24 G439 Y440 P25 G309 Y310
Gene Ontology
--> -->
 
 
UnboundLocalError
Python 3.6.8: /usr/bin/python3
Mon Mar 10 07:32:19 2025

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '5uqg', asym_id = 'D', title = 'Crystal Structure of the Catalytic Domain of the...bacter jejuni in the complex with inhibitor p200 '
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='5uqg', asym_id='D', title='Crystal Structure of the Catalytic Domain of the...bacter jejuni in the complex with inhibitor p200 ')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0003824,0003938,0006164,0016491', uniprot = '', pdbid = '5uqg', asym_id = 'D'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003824,0003938,0006164,0016491', uniprot='', pdbid='5uqg', asym_id='D')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>