Structure of PDB 5udx Chain D

Receptor sequence
>5udxD (length=240) Species: 220668 (Lactiplantibacillus plantarum WCFS1) [Search protein sequence]
ATLATKKATLVAALKDLQRVTVAFSGGIDSTLVLKMALDVLGRDNVTAVV
ANSELFTDEEFDKAMSLAEELGANVQGTTLDYLSDDHIKNNTPDSWYYAK
KMFYSRLNDIAANNGSAAVLDGMIARSLLQEADFFKTDVRALAQELGLTN
WNKVASCSVSSRFPYGTTLTHDNIAQVMAAEKYLRSLGFPTVRVRFHNDI
ARIELPEARIGDFLVFNDRVNRQLQSLGFRYVTLDLGGFR
3D structure
PDB5udx Structural insights into the catalytic mechanism of a sacrificial sulfur insertase of the N-type ATP pyrophosphatase family, LarE.
ChainD
Resolution2.784 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 4.4.1.37: pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 ZN D D59 D63 D58 D62
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0016783 sulfurtransferase activity
GO:0016829 lyase activity

View graph for
Molecular Function
External links
PDB RCSB:5udx, PDBe:5udx, PDBj:5udx
PDBsum5udx
PubMed28784764
UniProtF9UST4|LARE_LACPL Pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase (Gene Name=larE)

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