Structure of PDB 5til Chain D

Receptor sequence
>5tilD (length=275) Species: 10090 (Mus musculus) [Search protein sequence]
PHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPW
MEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSGC
DLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSG
AAEHYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVTL
RCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPL
GKEQNYTCRVYHEGLPEPLTLRWEP
3D structure
PDB5til Ternary complexes of TCR P14 give insights into the mechanisms behind reestablishment of CTL responses against a viral escape mutant
ChainD
Resolution2.83 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide D Y7 Y59 E63 K66 Q70 W73 V76 S77 Y84 Q97 F116 K146 W147 H155 Y156 Y159 E163 W167 Y171 Y6 Y58 E62 K65 Q69 W72 V75 S76 Y83 Q96 F115 K145 W146 H154 Y155 Y158 E162 W166 Y170
External links
PDB RCSB:5til, PDBe:5til, PDBj:5til
PDBsum5til
PubMed
UniProtP01899|HA11_MOUSE H-2 class I histocompatibility antigen, D-B alpha chain (Gene Name=H2-D1)

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