Structure of PDB 5ong Chain D

Receptor sequence
>5ongD (length=94) Species: 8355 (Xenopus laevis) [Search protein sequence]
KTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRL
AHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA
3D structure
PDB5ong Site-Specific Disulfide Crosslinked Nucleosomes with Enhanced Stability.
ChainD
Resolution2.797 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 dna D T29 S52 S53 R83 S84 T85 T2 S25 S26 R56 S57 T58
BS02 dna D R30 K31 S33 I36 R3 K4 S6 I9
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005694 chromosome

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:5ong, PDBe:5ong, PDBj:5ong
PDBsum5ong
PubMed29113904
UniProtP02281|H2B11_XENLA Histone H2B 1.1

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