Structure of PDB 5odu Chain D

Receptor sequence
>5oduD (length=121) Species: 29488 (Photorhabdus luminescens) [Search protein sequence]
SDWSGSVPANAENGKSTGLILKQGDTISVVAHGWVKYGRDNVEWAAPDGP
VPNNPQPSSIATLVAKIANKKFAIGNGVLHKTVPVDGELILLFNDVPGTF
GDNSGEFQVEVIIESRYSPLK
3D structure
PDB5odu Photorhabdus luminescens lectin A (PllA): A new probe for detecting alpha-galactoside-terminating glycoconjugates.
ChainD
Resolution1.56 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 AMG D Y38 E44 Q57 I61 D96 V97 T100 D103 Y37 E43 Q56 I60 D95 V96 T99 D102 MOAD: ic50=0.52mM
BS02 CA D Y38 D96 T100 D103 N104 Y37 D95 T99 D102 N103
Gene Ontology
Molecular Function
GO:0030246 carbohydrate binding
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:5odu, PDBe:5odu, PDBj:5odu
PDBsum5odu
PubMed28972138
UniProtQ7N561|PLLA_PHOLL Lectin A (Gene Name=pllA)

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