Structure of PDB 5nnw Chain D

Receptor sequence
>5nnwD (length=206) Species: 65070 (Pythium aphanidermatum) [Search protein sequence]
AVINHDAVPVWPQPEPADATQALAVRFKPQLDVVNGCQPYPAVDPQGNTS
GGLKPSAAACRDMSKAQVYSRSGTYNGYYAIMYSWYMPKDSIGHRHDWEN
VVVWLDNAASANIVALSASAHSGYKKSFPADKSYLDGITAKISYKSTWPL
DHELGFTTSAGKQQPLIQWEQMTQAARDALESTDFGNANVPFKSNFQDKL
VKAFFQ
3D structure
PDB5nnw Eudicot plant-specific sphingolipids determine host selectivity of microbial NLP cytolysins.
ChainD
Resolution1.54 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MG D E106 H159 E99 H152
BS02 GCS D D93 G100 H101 D158 D90 G93 H94 D151
Gene Ontology
Molecular Function
GO:0046872 metal ion binding
Biological Process
GO:0031640 killing of cells of another organism

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:5nnw, PDBe:5nnw, PDBj:5nnw
PDBsum5nnw
PubMed29242345
UniProtQ9SPD4

[Back to BioLiP]