Structure of PDB 5n6b Chain D

Receptor sequence
>5n6bD (length=276) Species: 9606 (Homo sapiens) [Search protein sequence]
GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAP
WIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG
CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAA
HVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT
LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVP
SGQEQRYTCHVQHEGLPKPLTLRWEP
3D structure
PDB5n6b T cell receptor alpha variable 12-2 bias in the immunodominant response to Yellow fever virus.
ChainD
Resolution1.71 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide D A149 H151 E154 A149 H151 E154
BS02 peptide D Y7 E63 K66 V67 H70 D77 Y84 Y99 Y116 T143 K146 W147 Q155 L156 Y159 W167 Y171 Y7 E63 K66 V67 H70 D77 Y84 Y99 Y116 T143 K146 W147 Q155 L156 Y159 W167 Y171
External links
PDB RCSB:5n6b, PDBe:5n6b, PDBj:5n6b
PDBsum5n6b
PubMed28975614
UniProtP04439|HLAA_HUMAN HLA class I histocompatibility antigen, A alpha chain (Gene Name=HLA-A)

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