Structure of PDB 5mzm Chain D

Receptor sequence
>5mzmD (length=271) Species: 10090 (Mus musculus) [Search protein sequence]
GPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAP
WMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSG
CDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQS
GAAEHYKAYLEGECVEWLHRYLKNGLRTDSPKAHVTHHPRSKGEVTLRCW
ALGFYPADITLTWQLNGEETQDMELVETRPAGDGTFQKWASVVVPLGKEQ
NYTCRVYHEGLPEPLTLRWEP
3D structure
PDB5mzm The Immunogenicity of a Proline-Substituted Altered Peptide Ligand toward the Cancer-Associated TEIPP Neoepitope Trh4 Is Unrelated to Complex Stability.
ChainD
Resolution2.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide D Y7 E63 K66 Q70 W73 S77 Y84 F116 Y123 T143 W147 H155 Y156 Y159 E163 W167 Y171 Y7 E63 K66 Q70 W73 S77 Y84 F116 Y123 T143 W147 H155 Y156 Y159 E163 W167 Y171
External links
PDB RCSB:5mzm, PDBe:5mzm, PDBj:5mzm
PDBsum5mzm
PubMed29507106
UniProtP01899|HA11_MOUSE H-2 class I histocompatibility antigen, D-B alpha chain (Gene Name=H2-D1)

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