Structure of PDB 5lfg Chain D

Receptor sequence
>5lfgD (length=142) Species: 35730 (Trematomus newnesi) [Search protein sequence]
VEWTDKERSIISDIFSHMDYDDIGPKALSRCLVVYPWTQRYFSGFGNLYG
IMSNANVAAHGIKVLHGLDRGMKNMDNIADAYTDLSTLHSEKLHVDPDNF
KLLSDCITIVLAAKMGHAFTAETQGAFQKFLAAVVSALGKQY
3D structure
PDB5lfg Fine Sampling of the RT Quaternary-Structure Transition of a Tetrameric Hemoglobin.
ChainD
Resolution1.94 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 HEM D T38 Y41 F42 H63 V67 L88 H92 L96 V98 N102 F103 L141 T38 Y41 F42 H60 V64 L85 H89 L93 V95 N99 F100 L138
Gene Ontology
Molecular Function
GO:0004601 peroxidase activity
GO:0005344 oxygen carrier activity
GO:0019825 oxygen binding
GO:0020037 heme binding
GO:0031720 haptoglobin binding
GO:0043177 organic acid binding
GO:0046872 metal ion binding
Biological Process
GO:0015671 oxygen transport
GO:0042744 hydrogen peroxide catabolic process
GO:0098869 cellular oxidant detoxification
Cellular Component
GO:0005833 hemoglobin complex
GO:0031838 haptoglobin-hemoglobin complex
GO:0072562 blood microparticle

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5lfg, PDBe:5lfg, PDBj:5lfg
PDBsum5lfg
PubMed27808442
UniProtP45720|HBB_TRENE Hemoglobin subunit beta-1/2

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