Structure of PDB 5l3s Chain D

Receptor sequence
>5l3sD (length=271) Species: 330779 (Sulfolobus acidocaldarius DSM 639) [Search protein sequence]
EDDLNDVIEELRFQLLDSDVSYEVTEKILEDLKNNLIGKEVEEIVINTLK
KSITEILTKNQKTDLIEKIRSSGKKPFVIIFFGVNGVGKTTTIAKVVNML
KKNNLSTIIAASDTFRAAAQEQLAYHASKLEVQLIRGKYGADPASVAFDA
ISFAKSRNIDVVLIDTAGRMHIDSDLVEELKKVLRIAKPDFRILILDSLA
GSDALEQARHFENNVGYDAVILTKVDADAKGGIALSLAYELKKPVVYMGV
GQNYDDLIPFSPDWFVERIFS
3D structure
PDB5l3s Structural Basis for Conserved Regulation and Adaptation of the Signal Recognition Particle Targeting Complex.
ChainD
Resolution1.9 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.6.5.4: signal-recognition-particle GTPase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GNP D N182 G183 G185 K186 T187 T188 R213 K321 D323 G346 G348 Q349 N85 G86 G88 K89 T90 T91 R116 K224 D226 G249 G251 Q252
Gene Ontology
Molecular Function
GO:0005525 GTP binding
GO:0016887 ATP hydrolysis activity
Biological Process
GO:0006614 SRP-dependent cotranslational protein targeting to membrane

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:5l3s, PDBe:5l3s, PDBj:5l3s
PDBsum5l3s
PubMed27241309
UniProtP27414|FTSY_SULAC Signal recognition particle receptor FtsY (Gene Name=ftsY)

[Back to BioLiP]