Structure of PDB 5ksr Chain D

Receptor sequence
>5ksrD (length=259) Species: 160492 (Xylella fastidiosa 9a5c) [Search protein sequence]
MRVLVSNDDGVDAPGIKILADALRNAGHEVMVVAPDRDRSGASNSLTLDT
PIRAKQIDMHTYSVAGTPTDCVHLALTGLLNYDPDIVVSGINNTGNLGDD
VIYSGTVSAAMEGRFLGLPAVAVSLVTLYREGQQAPQYETAAHAAINIVA
QLKTDPLPADTILNVNVPDVTWQQMRGFKVTRLGNRHRSAPCLTQTDPRG
HTIYWIGPAGPEQDAGPGTDFDAVRNTYISITPIHVDLTRYQALENVTRW
TDRLTAHMD
3D structure
PDB5ksr Conformational variability of the stationary phase survival protein E from Xylella fastidiosa revealed by X-ray crystallography, small-angle X-ray scattering studies, and normal mode analysis.
ChainD
Resolution1.96 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.1.3.5: 5'-nucleotidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MN D D8 D9 N92 D8 D9 N92
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0004309 exopolyphosphatase activity
GO:0008252 nucleotidase activity
GO:0008253 5'-nucleotidase activity
GO:0008254 3'-nucleotidase activity
GO:0016787 hydrolase activity
GO:0042802 identical protein binding
GO:0046872 metal ion binding
GO:0106411 XMP 5'-nucleosidase activity
Cellular Component
GO:0005737 cytoplasm

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:5ksr, PDBe:5ksr, PDBj:5ksr
PDBsum5ksr
PubMed28677327
UniProtQ9PF20|SURE_XYLFA 5'-nucleotidase SurE (Gene Name=surE)

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