Structure of PDB 5k5r Chain D

Receptor sequence
>5k5rD (length=90) Species: 84600 (Sulfolobus sp. NOB8H2) [Search protein sequence]
GKISTDKYIFLTPRAYIIVHLLKVGKAKASEISENTQIPYQTVIQNIRWL
LAEGYVVKEQKGEEIYYKLTDKGKQLATAELEKIRKLVEV
3D structure
PDB5k5r Structures of archaeal DNA segregation machinery reveal bacterial and eukaryotic linkages.
ChainD
Resolution3.09 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 dna D G2 K3 K8 Y9 P40 Q42 T43 Q46 N47 G1 K2 K7 Y8 P39 Q41 T42 Q45 N46
BS02 dna D G2 K3 I4 S5 A30 Y41 Q42 I45 R49 E65 Y68 G1 K2 I3 S4 A29 Y40 Q41 I44 R48 E64 Y67
Gene Ontology
Molecular Function
GO:0003700 DNA-binding transcription factor activity
GO:0005515 protein binding
GO:0042802 identical protein binding
Biological Process
GO:0006355 regulation of DNA-templated transcription

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:5k5r, PDBe:5k5r, PDBj:5k5r
PDBsum5k5r
PubMed26339031
UniProtO93706

[Back to BioLiP]