Structure of PDB 5k1y Chain D

Receptor sequence
>5k1yD (length=92) Species: 84600 (Sulfolobus sp. NOB8H2) [Search protein sequence]
GKISTDKYIFLTPRAYIIVHLLKVGKAKASEISENTQIPYQTVIQNIRWL
LAEGYVVKEQKGEEIYYKLTDKGKQLATAELEKIRKLVEVVQ
3D structure
PDB5k1y Detailed structural analysis of AspA-DNA contacts
ChainD
Resolution2.97 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 dna D G2 K3 Y9 P14 P40 Q42 T43 Q46 G1 K2 Y8 P13 P39 Q41 T42 Q45
BS02 dna D G2 K3 S5 A30 Y41 I45 R49 Y68 G1 K2 S4 A29 Y40 I44 R48 Y67
Gene Ontology
Molecular Function
GO:0003700 DNA-binding transcription factor activity
GO:0005515 protein binding
GO:0042802 identical protein binding
Biological Process
GO:0006355 regulation of DNA-templated transcription

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:5k1y, PDBe:5k1y, PDBj:5k1y
PDBsum5k1y
PubMed
UniProtO93706

[Back to BioLiP]