Structure of PDB 5ifj Chain D

Receptor sequence

>5ifjD (length=217) Species: 9606 (Homo sapiens) [Search protein sequence]

EVQLLESGGGLVQPGGSLRLSCAASGFTFSTYAMSWVRQAPGKGLEWVSG
ISGSGGSTYYADSVKGRFTTSRDNSKNTLYLQMNSLRAEDTAVYYCAKFS
GKDCSGTSCRDYWGQGTLVTVSSASTKGPSVFPLAPGTAALGCLVKDYFP
EPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICN
VNHKPSNTKVDKKVEPK

3D structure

PDB

5ifj Stereotyped antibody responses target posttranslationally modified gluten in celiac disease.

Chain

Resolution

2.35 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	D	A38 W52 G55 S57 S64 Y66 G109 K110	A33 W47 G50 S52 S57 Y59 G101 K102

External links

PDB	RCSB:5ifj, PDBe:5ifj, PDBj:5ifj
PDBsum	5ifj
PubMed	28878138

[Back to BioLiP]