Structure of PDB 5icx Chain D

Receptor sequence

>5icxD (length=212) Species: 10090 (Mus musculus) [Search protein sequence]

QVQLKQSGPGLVQPSQSLSITCTVSGFSLTNYGVHWVRQSPGKGLEWLGV
IWSGGNTDYNTPFTSRLSINKDNSKSQVFFKMNSLQSNDTAIYYCARALT
YYDYEFAYWGQGTLVTVSAASTKGPSVFPLAGTAALGCLVKDYFPEPVTV
SWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKP
SNTKVDKRVEPK

3D structure

PDB

5icx Cyclization strategies of meditopes: affinity and diffraction studies of meditope-Fab complexes.

Chain

Resolution

2.6 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	D	Q39 P41 I92 Y94 Q111 E154 P173	Q39 P41 I92 Y94 Q111 E146 P165

External links

PDB	RCSB:5icx, PDBe:5icx, PDBj:5icx
PDBsum	5icx
PubMed	27303895

[Back to BioLiP]