Structure of PDB 5i7f Chain D

Receptor sequence
>5i7fD (length=257) Species: 28450 (Burkholderia pseudomallei) [Search protein sequence]
GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEF
AAEFGSELVFPCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIA
GDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER
AIPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIK
SFGKILDFVESNSPLKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGF
NAVVGGM
3D structure
PDB5i7f Rationalizing the Binding Kinetics for the Inhibition of the Burkholderia pseudomallei FabI1 Enoyl-ACP Reductase.
ChainD
Resolution2.7 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) Y156 K163
Catalytic site (residue number reindexed from 1) Y155 K162
Enzyme Commision number 1.3.1.9: enoyl-[acyl-carrier-protein] reductase (NADH).
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 NAD D G13 S19 I20 D64 V65 S91 I92 G93 I119 S145 K163 A189 P191 I192 T194 A196 G12 S18 I19 D63 V64 S90 I91 G92 I118 S144 K162 A188 P190 I191 T193 A195
BS02 68O D G93 F94 Y146 Y156 A196 A197 I200 F203 G92 F93 Y145 Y155 A195 A196 I199 F202
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0004318 enoyl-[acyl-carrier-protein] reductase (NADH) activity
GO:0016491 oxidoreductase activity
Biological Process
GO:0006633 fatty acid biosynthetic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:5i7f, PDBe:5i7f, PDBj:5i7f
PDBsum5i7f
PubMed28225601
UniProtA0A0H3HP34

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