Structure of PDB 5i48 Chain D

Receptor sequence
>5i48D (length=324) Species: 556 (Dickeya chrysanthemi) [Search protein sequence]
LPNIVILATGGTIAGSAATGTQTTGYKIGALGVDTLINAVPEVKKLANVK
GEQFSNMASQNMTGDVVLKLSQRVNELLARDDVDGVVITHGTDTVEESAY
FLHLTVKSDKPVVFVAAMRPATAISADGPMNLLEAVRVAGDKQSRGRGVM
VVLNDRIGSARYITKTNASTLDTFKANEEGYLGVIIGNRIYYQNRIDKLH
TTRSVFDVRGLTSLPKVDILYGYQDDPEYLYDAAIQHGVKGIVYAGMGAG
SVSVRGIAGMRKAMEKGVVVIRSTRTGNGIVPPDEELPGLVSDSLNPAHA
RILLMLALTRTSDPKVIQEYFHTY
3D structure
PDB5i48 Design and Characterization of Erwinia Chrysanthemi l-Asparaginase Variants with Diminished l-Glutaminase Activity.
ChainD
Resolution1.5 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) T15 Y29 T95 D96 K168
Catalytic site (residue number reindexed from 1) T12 Y26 T92 D93 K165
Enzyme Commision number 3.5.1.1: asparaginase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ASP D T15 A61 S62 Q63 G94 T95 D96 T12 A58 S59 Q60 G91 T92 D93
Gene Ontology
Molecular Function
GO:0004067 asparaginase activity
GO:0016787 hydrolase activity
Biological Process
GO:0006520 amino acid metabolic process
GO:0006528 asparagine metabolic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:5i48, PDBe:5i48, PDBj:5i48
PDBsum5i48
PubMed27354283
UniProtP06608|ASPG_DICCH L-asparaginase (Gene Name=ansB)

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