Structure of PDB 5hfj Chain D

Receptor sequence
>5hfjD (length=188) Species: 85962 (Helicobacter pylori 26695) [Search protein sequence]
MIQIYHADAFEIIKDFYQQNLKVDAIITDPPFKLLEWIARYAPLVNPNGC
MVIFCSYRFISYIADFLEENGFVVKDFIQWVKNNPMPRNIHRRYVQDTEF
ALWAVKKKAKWVFNKPKNEKYLRPLILKSSLALMEKIISIHTNPNDIVLD
PFMGSGTTGLACKNLERNFIGIESEKEYFQTAKKRLNL
3D structure
PDB5hfj Biochemical and structural characterization of a DNA N6-adenine methyltransferase from Helicobacter pylori
ChainD
Resolution3.1 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) D29 P30
Catalytic site (residue number reindexed from 1) D29 P30
Enzyme Commision number 2.1.1.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 SAM D D8 A9 D29 P31 F195 M196 G197 S198 E216 S217 D8 A9 D29 P31 F152 M153 G154 S155 E173 S174
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0008168 methyltransferase activity
GO:0008170 N-methyltransferase activity
GO:0009007 site-specific DNA-methyltransferase (adenine-specific) activity
Biological Process
GO:0009307 DNA restriction-modification system
GO:0032259 methylation
Cellular Component
GO:0005737 cytoplasm

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Biological Process
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Cellular Component
External links
PDB RCSB:5hfj, PDBe:5hfj, PDBj:5hfj
PDBsum5hfj
PubMed27259995
UniProtO24891

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