Structure of PDB 5h8l Chain D

Receptor sequence
>5h8lD (length=298) Species: 3880 (Medicago truncatula) [Search protein sequence]
DKGRKVVVSALQFACTDDVSTNVTTAERLVRAAHKQGANIVLIQELFEGY
YFCQAQREDFIQRAKPYKDHPTIMRLQKLAKELGVVIPVSFFEEANNAHY
NSIAIIDADGTDLGIYRKSHIPDGPGYEEKFYFNPGDTGFKVFQTKYAKI
GVAISWDQWFPEAARAMALQGAEILFYPTAIGSEPHDQSIDSRDHWKRVM
QGHAGANLVPLVASNRIGNEIIETEHGKSEIKFYGNSFIAGPTGEIVSIA
DDKEEAVLIAEFNLDKIKSMRHCWGVFRDRRPDLYKVLLTLDGKNPVL
3D structure
PDB5h8l Structural Investigations of N-carbamoylputrescine Amidohydrolase from Medicago truncatula: Insights into the Ultimate Step of Putrescine Biosynthesis in Plants.
ChainD
Resolution2.29 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) E48 N104 K121 E132 S158 A183
Catalytic site (residue number reindexed from 1) E45 N101 K118 E129 S155 A180
Enzyme Commision number 3.5.1.53: N-carbamoylputrescine amidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 PUT D Y130 W159 I184 E187 Y127 W156 I181 E184
Gene Ontology
Molecular Function
GO:0016787 hydrolase activity
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0050126 N-carbamoylputrescine amidase activity
Biological Process
GO:0006596 polyamine biosynthetic process
GO:0033388 putrescine biosynthetic process from arginine

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Molecular Function
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Biological Process
External links
PDB RCSB:5h8l, PDBe:5h8l, PDBj:5h8l
PDBsum5h8l
PubMed27066023
UniProtG7ITU5

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