Structure of PDB 5fyr Chain D

Receptor sequence
>5fyrD (length=297) Species: 306 (Pseudomonas sp.) [Search protein sequence]
QESPAFIDPASWNTPFNGIAQVACHNCYEKQYANTFSSVLDSVRTLELDF
WDQRDAVSGGSPHHWFVRHNPGTLFQSGNDNNCTGDGTGKNDLEACLNDV
KNWSDKHPGHFPITLILDKKQGWSKESSGRTPKDFDELVARVFQGKLFTP
QDLATHIGSGAGALQGNLKGKSWPTANDLQGKVLLVLNHSENQKLSQYAE
ARTSKAKVFISPVTNGQNDISGKVSGMSSQSSGYVAMNNMGKGDKSWAKQ
AFAYSHIGRVWGDDEVSFAQHINQKINLSAYYRFAAQSAGGYRIRPF
3D structure
PDB5fyr The structure of a calcium-dependent phosphoinositide-specific phospholipase C from Pseudomonas sp. 62186, the first from a Gram-negative bacterium.
ChainD
Resolution1.45 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 INS D H26 E48 D119 N189 R260 W262 H25 E47 D118 N188 R259 W261
BS02 CA D N27 E48 D50 D119 N26 E47 D49 D118
Gene Ontology
Molecular Function
GO:0008081 phosphoric diester hydrolase activity
GO:0046872 metal ion binding
Biological Process
GO:0006629 lipid metabolic process

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Molecular Function

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Biological Process
External links
PDB RCSB:5fyr, PDBe:5fyr, PDBj:5fyr
PDBsum5fyr
PubMed28045383
UniProtA0A1S4NYD4

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