Structure of PDB 5ef1 Chain D

Receptor sequence
>5ef1D (length=69) Species: 1422 (Geobacillus stearothermophilus) [Search protein sequence]
SDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIK
VRGKAYIQTRHGVIESEGK
3D structure
PDB5ef1 RNA protects a nucleoprotein complex against radiation damage.
ChainD
Resolution1.98 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 TRP D G23 Q47 T49 T52 I55 G17 Q41 T43 T46 I49
BS02 TRP D T25 R26 G27 T30 S53 T19 R20 G21 T24 S47
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0005515 protein binding
GO:0042802 identical protein binding
Biological Process
GO:0006353 DNA-templated transcription termination
GO:0006355 regulation of DNA-templated transcription

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Molecular Function
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Biological Process
External links
PDB RCSB:5ef1, PDBe:5ef1, PDBj:5ef1
PDBsum5ef1
PubMed27139628
UniProtQ9X6J6|MTRB_GEOSE Transcription attenuation protein MtrB (Gene Name=mtrB)

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