Structure of PDB 5ech Chain D

Receptor sequence
>5echD (length=569) Species: 3702 (Arabidopsis thaliana) [Search protein sequence]
TFDMNRVIDEFDEMTRNAHQVQKQTLKEILLKNQSAIYLQNCGLNGNATD
PEEAFKSMVPLVTDVELEPYIKRMVDGDTSPILTGHPVPAISLSSGTSQG
RPKFIPFTDELMENTLQLFRTAFAFRNRDFPIDDNGKALQFIFSSKQYIS
TGGVPVGTATTNVYRNPNFKAGMKSITSPSCSPDEVIFSPDVHQALYCHL
LSGILFRDQVQYVFAVFAHGLVHAFRTFEQVWEEIVTDIKDGVLSNRITV
PSVRTAMSKLLTPNPELAETIRTKCMSLSNWYGLIPALFPNAKYVYGIMT
GSMEPYVPKLRHYAGDLPLVSHDYGSSEGWIAANVTPRLSPEEATFAVIP
NLGYFEFLPVSETGEGEEKPVGLTQVKIGEEYEVVITNYAGLYRYRLGDV
VKVIGFYNNTPQLKFICRRNLILSINIDKNTERDLQLSVESAAKRLSEEK
IEVIDFSSYIDVSTDPGHYAIFWEISGETNEDVLQDCCNCLDRAFIDAGY
VSSRKCKTIGALELRVVAKGTFRKIQEHFLGLGSSAGQFKMPRCVKPSNA
KVLQILCENVVSSYFSTAF
3D structure
PDB5ech Structural basis of jasmonate-amido synthetase FIN219 in complex with glutathione S-transferase FIP1 during the JA signal regulation
ChainD
Resolution2.14 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 6.3.2.52: jasmonoyl--L-amino acid ligase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 JAA D T121 L124 F125 F220 V222 H328 W336 T115 L118 F119 F214 V216 H322 W330
BS02 ATP D A96 I97 S98 P112 F113 L117 M118 T121 G163 T164 A165 N168 V169 G331 S332 S333 W336 K557 A90 I91 S92 P106 F107 L111 M112 T115 G157 T158 A159 N162 V163 G325 S326 S327 W330 K551
Gene Ontology
Molecular Function
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0016597 amino acid binding
GO:0016874 ligase activity
GO:0016881 acid-amino acid ligase activity
GO:0019899 enzyme binding
GO:0070728 L-leucine binding
GO:0080123 jasmonoyl-L-amino acid ligase activity
Biological Process
GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway
GO:0010046 response to mycotoxin
GO:0010224 response to UV-B
GO:0018117 protein adenylylation
GO:0045087 innate immune response
GO:0071365 cellular response to auxin stimulus
GO:2000030 regulation of response to red or far red light
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5ech, PDBe:5ech, PDBj:5ech
PDBsum5ech
PubMed28223489
UniProtQ9SKE2|JAR1_ARATH Jasmonoyl--L-amino acid synthetase JAR1 (Gene Name=JAR1)

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