Structure of PDB 5e8p Chain D

Receptor sequence
>5e8pD (length=271) Species: 10090 (Mus musculus) [Search protein sequence]
GPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAP
WMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSG
CDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQS
GAAEHYKAYLEGECVEWLHRYLKNGRTDSPKAHVTHHPRSKGEVTLRCWA
LGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPLGKEQ
NYTCRVYHEGLPEPLTLRWEP
3D structure
PDB5e8p The MHC Class I Cancer-Associated Neoepitope Trh4 Linked with Impaired Peptide Processing Induces a Unique Noncanonical TCR Conformer.
ChainD
Resolution2.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide D Y7 E63 K66 Q70 W73 S77 N80 Y84 L95 F116 Y123 W147 Y156 Y159 E163 W167 Y171 Y7 E63 K66 Q70 W73 S77 N80 Y84 L95 F116 Y123 W147 Y156 Y159 E163 W167 Y171
External links
PDB RCSB:5e8p, PDBe:5e8p, PDBj:5e8p
PDBsum5e8p
PubMed26800871
UniProtP01899|HA11_MOUSE H-2 class I histocompatibility antigen, D-B alpha chain (Gene Name=H2-D1)

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