Structure of PDB 5ddu Chain D

Receptor sequence
>5dduD (length=513) Species: 1074250 (Actinoalloteichus sp. WH1-2216-6) [Search protein sequence]
SGEPVYADAVLNGWLTSMGLGVEYVRAEGNTVYYLDDEGREVPVLDHACG
FGSLIFGHNHPEIIAHAKAALDAGTVVHAQLSRQPRANQISRILNDIMRR
ETGRDDRYNAIFANSGAEANEICMKHAELERQERITALFAEIDAELDTAR
EALTTGTATLDTASLPLVDVDGVIADIHRHNDERRAERPLFLTLDGSFHG
KLVGSIQLTQNEPWRTPFTALSSPARFLPADEPELIGKIVEDERRSVLTL
SLDKDTVRVVERDFPVVAAIFVEPVRGGSGMKTVTPELAEELHRLRDTLG
CPLVVDEVQTGIGRTGAFFGSALLGIRGDYYTLAKAIGGGIVKNSVALIR
QDRFLPAMEVIHSSTFAKDGLSASIALKVLEMVEADGGRVYQRVRERGQR
LEAMLESVRADHSDVVSAVWGTGLMLALELRDQSNATSQAIREKAAHGFL
GYVLAGFLLREHHIRVLPAGPRSGFLRFSPSLYITDEEIDRTETALRSLF
TALRDQDGDRLVL
3D structure
PDB5ddu Biochemical and Structural Insights into the Aminotransferase CrmG in Caerulomycin Biosynthesis
ChainD
Resolution2.46 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) V26 F207 E282 D315 Q318 K344 R486
Catalytic site (residue number reindexed from 1) V22 F198 E273 D306 Q309 K335 R477
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 PMP D G120 A121 F207 H208 E282 D315 V317 Q318 G116 A117 F198 H199 E273 D306 V308 Q309
Gene Ontology
Molecular Function
GO:0008483 transaminase activity
GO:0030170 pyridoxal phosphate binding
GO:0042802 identical protein binding

View graph for
Molecular Function
External links
PDB RCSB:5ddu, PDBe:5ddu, PDBj:5ddu
PDBsum5ddu
PubMed26714051
UniProtH8Y6N2

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