Structure of PDB 5ddr Chain D

Receptor sequence
>5ddrD (length=94) Species: 9606 (Homo sapiens) [Search protein sequence]
ETRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQ
AFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMK
3D structure
PDB5ddr Structural and Dynamic Basis for Low-Affinity, High-Selectivity Binding of L-Glutamine by the Glutamine Riboswitch.
ChainD
Resolution2.605 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna D Y12 N15 E18 K21 L43 S45 R46 S47 L48 K49 M50 R51 Q53 F55 K79 Q84 K87 T88 D89 S90 D91 Y9 N12 E15 K18 L40 S42 R43 S44 L45 K46 M47 R48 Q50 F52 K76 Q81 K84 T85 D86 S87 D88
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding

View graph for
Molecular Function
External links
PDB RCSB:5ddr, PDBe:5ddr, PDBj:5ddr
PDBsum5ddr
PubMed26655897
UniProtP09012|SNRPA_HUMAN U1 small nuclear ribonucleoprotein A (Gene Name=SNRPA)

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