Structure of PDB 5da5 Chain D

Receptor sequence
>5da5D (length=91) Species: 1085 (Rhodospirillum rubrum) [Search protein sequence]
STHEPLEVLKEETVNRHRAIVSVMEELEAVDWYDQRVDASTDPELTAILA
HNRDEEKEHAAMTLEWLRRNDAKWAEHLRTYLFTEGPITAA
3D structure
PDB5da5 Structural characterization of encapsulated ferritin provides insight into iron storage in bacterial nanocompartments.
ChainD
Resolution2.064 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.16.3.1: ferroxidase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 FE D E32 E62 H65 E26 E56 H59
BS02 GOA D E32 A35 E62 E26 A29 E56
BS03 CA D H57 E61 H51 E55
BS04 CA D E31 E34 E25 E28
BS05 CA D E61 E64 E55 E58
Gene Ontology
Molecular Function
GO:0004322 ferroxidase activity
Cellular Component
GO:0140737 encapsulin nanocompartment

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:5da5, PDBe:5da5, PDBj:5da5
PDBsum5da5
PubMed27529188
UniProtQ2RVS1|FER_RHORT Encapsulated ferritin-like protein (Gene Name=fer)

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