Structure of PDB 5d5v Chain D

Receptor sequence
>5d5vD (length=107) Species: 9606 (Homo sapiens) [Search protein sequence]
SNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLPKYFK
HNNMASFVRQLNMYGFRKVVHIEQGGVKPERDDTEFQHPCFLRGQEQLLE
NIKRKVT
3D structure
PDB5d5v Structure of human heat-shock transcription factor 1 in complex with DNA.
ChainD
Resolution2.55 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna D K62 R71 N74 K50 R59 N62
BS02 dna D K62 H63 N65 S68 Q72 Y76 R117 K50 H51 N53 S56 Q60 Y64 R104
BS03 MG D L25 V26 D28 T31 D32 I35 L13 V14 D16 T19 D20 I23
Gene Ontology
Molecular Function
GO:0003700 DNA-binding transcription factor activity
GO:0043565 sequence-specific DNA binding
Biological Process
GO:0006355 regulation of DNA-templated transcription

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:5d5v, PDBe:5d5v, PDBj:5d5v
PDBsum5d5v
PubMed26727489
UniProtQ00613|HSF1_HUMAN Heat shock factor protein 1 (Gene Name=HSF1)

[Back to BioLiP]