Structure of PDB 5cpw Chain D

Receptor sequence
>5cpwD (length=283) [Search protein sequence]
MEVLDLVTGPDSVTEIEAFLNPRMGQPPTPESLTEGGQYYGWSRGINLAT
SDTEDSPENNTLPTWSMAKLQLPMLNEDLTCDTLQMWEAVSVKTEVVGSG
SLLDVHGFNKPTDTVNTKGISTPVEGSQYHVFAVGGEPLDLQGLVTDART
KYKEEGVVTIKTITKKDMVNKDQVLNPISKAKLDKDGMYPVEIWHPDPAK
NENTRYFGNYTGGTTTPPVLQFTNTLTTVLLDENGVGPLCKGEGLYLSCV
DIMGWRVTRNYDVHHWRGLPRYFKITLRKRWVK
3D structure
PDB5cpw Structural and Functional Analysis of Murine Polyomavirus Capsid Proteins Establish the Determinants of Ligand Recognition and Pathogenicity.
ChainD
Resolution1.75 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GAL D G78 E91 N93 G45 E58 N60
BS02 SIA D Y72 R77 H298 Y39 R44 H265
BS03 SIA D T67 E68 Y72 R77 T34 E35 Y39 R44
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Cellular Component
GO:0019028 viral capsid

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Molecular Function
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Cellular Component
External links
PDB RCSB:5cpw, PDBe:5cpw, PDBj:5cpw
PDBsum5cpw
PubMed26474293
UniProtP49302|VP1_POVMP Capsid protein VP1

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