Structure of PDB 5c8a Chain D

Receptor sequence
>5c8aD (length=194) Species: 262724 (Thermus thermophilus HB27) [Search protein sequence]
EDLGTGLLEALLRGDLAGAEALFRRGLRFWGPEGVLEHLLLPVLREVGEA
WHRGEIGVAEEHLASTFLRARLQELLDLAGFPPGPPVLVTTPPGERHEIG
AMLAAYHLRRKGVPALYLGPDTPLPDLRALARRLGAGAVVLSAVLSEPLR
ALPDGALKDLAPRVFLGGQGAGPEEARRLGAEYMEDLKGLAEAL
3D structure
PDB5c8a Structural basis for gene regulation by a B12-dependent photoreceptor.
ChainD
Resolution2.15 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 B12 D L124 G128 E141 S145 G174 R176 H177 E178 I179 G180 S222 L225 G247 G248 Q249 M264 D266 L267 L44 G48 E61 S65 G94 R96 H97 E98 I99 G100 S142 L145 G167 G168 Q169 M184 D186 L187
Gene Ontology
Molecular Function
GO:0031419 cobalamin binding
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:5c8a, PDBe:5c8a, PDBj:5c8a
PDBsum5c8a
PubMed26416754
UniProtQ746J7

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