Structure of PDB 5bpi Chain D

Receptor sequence
>5bpiD (length=255) Species: 2261 (Pyrococcus furiosus) [Search protein sequence]
SKDRMVELLQEHFELNLYEARAYVALVAFGVLTPAELASVSEVPAPRTYD
VLRSLEKKGFAMTQPGKTNKYRPVHPANVLEKFIQDWQERVKEELEAKKK
AKEELLELMAPLIEERVWVVRGIKNSTLKTKEMLEEAQNEILLADDGFIA
VNLEDDIIKAVDRGVKTKILLTKNLLPRLKASKIIDYAKEGKLELRALDK
FDLPMLICDEEVFFALEDLAARYFNYETQVWIKDHRVVALFKEKFNEYWE
KAEKV
3D structure
PDB5bpi Structural Insights into Nonspecific Binding of DNA by TrmBL2, an Archaeal Chromatin Protein.
ChainD
Resolution3.198 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna D L18 Y19 P45 P47 L17 Y18 P44 P46
BS02 dna D P47 Y50 R54 P46 Y49 R53
Gene Ontology

View graph for
Molecular Function
External links
PDB RCSB:5bpi, PDBe:5bpi, PDBj:5bpi
PDBsum5bpi
PubMed26299937
UniProtQ8U3H1|TMBL2_PYRFU Putative HTH-type transcriptional regulator TrmBL2 (Gene Name=trmBL2)

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