Structure of PDB 5bkn Chain D

Receptor sequence
>5bknD (length=144) Species: 12881 (Satellite tobacco mosaic virus) [Search protein sequence]
NSNVVTMIRAGSYPKVNPTPTWVRAIPFEVSVQSGIAFKVPVGSLFSANF
RTDSFTSVTVMSVRAWTQLTPPVNEYSFVRLKPLFKTGDSTEEFEGRASN
INTRASVGYRIPTNLRQNTVAADNVCEVRSNCRQVALVISCCFN
3D structure
PDB5bkn Structures of additional crystal forms of Satellite tobacco mosaic virus grown from a variety of salts.
ChainD
Resolution3.0 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna D T36 V38 T21 V23
BS02 rna D N16 S17 N1 S2
BS03 rna D V38 A40 S155 V23 A25 S140
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Cellular Component
GO:0019028 viral capsid

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:5bkn, PDBe:5bkn, PDBj:5bkn
PDBsum5bkn
PubMed34866603
UniProtP17574|COAT_STMV Coat protein

[Back to BioLiP]