Structure of PDB 5bk7 Chain D

Receptor sequence
>5bk7D (length=368) Species: 141454 (Streptomyces wadayamensis) [Search protein sequence]
KENLTQWAYLALNSELNIADGHARQALSPGQQKIVNELPVLWAESEQRPV
QQIESEAHQAYFTLLGQHGYPAEPGRVLSCYSSSVSMEILARSLSASVDR
VALVHPTFDNIADLLRGNGLDLVPVEEDALHGADLSAELLSSVGCVFVTT
PNNPTGRVLAEERLRRLAEQCAEHGTVLALDTSFRGFDAAAHYDHYAVLQ
EAGCRWVVIEDTGKLWPTLDLKAGLLVFSEDIGLPVEKIYSDILLGVSPL
ILALIREFSRDAADGGLADLHAFILHNRSVVRRALAGVEGVSFPDPESRS
SVERVAFAGRTGTEVWEELQRHHVFALPCRQFHWAEPSDGDHMVRIALSR
STEPLEKSVQVLRTVLET
3D structure
PDB5bk7 Streptomyces wadayamensis MppP is a PLP-Dependent Oxidase, Not an Oxygenase.
ChainD
Resolution2.196 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 EQJ D D249 I250 L251 D242 I243 L244
BS02 EQJ D T12 D27 G28 H29 S89 S90 S91 F115 N160 D188 K221 K229 R352 T5 D20 G21 H22 S82 S83 S84 F108 N153 D181 K214 K222 R345
Gene Ontology
Molecular Function
GO:0008483 transaminase activity
GO:0030170 pyridoxal phosphate binding
GO:0046872 metal ion binding
Biological Process
GO:0006520 amino acid metabolic process
GO:0009058 biosynthetic process

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Molecular Function
View graph for
Biological Process
External links
PDB RCSB:5bk7, PDBe:5bk7, PDBj:5bk7
PDBsum5bk7
PubMed29473729
UniProtA0A0X1KHF5

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