Structure of PDB 5b7b Chain D

Receptor sequence
>5b7bD (length=419) Species: 381518 (Influenza A virus (A/Wilson-Smith/1933(H1N1))) [Search protein sequence]
NATEIRASVGKMIDGIGRFYIQMCTELKLSDYEGRLIQNSLTIERMVLSA
FDTGGPIYRRVDGKWRRELILYDKEEIRRIWRQANNGDDATAGLTHMMIW
HSNLNDATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTM
VMELIRMIKRGIRRTRIAYERMCNILKGKFQTAAQRTMVDQVRESRNPGN
AEFEDLIFLARSALILRGSVAHKSCLPACVYGSAVASGYDFEREGYSLVG
IDPFRLLQNSQVYSLIRPNENPAHKSQLVWMACHSAAFEDLRVSSFIRGT
KVVPRGKLSTRGVQIASNENMETMESSTLELRSRYWAIRTRSGGNTSGQI
SIQPTFSVQRNLPFDRPTIMAASDMRTEIIRLMESARPEDVSFQGRGVFE
LSDEKATSPIVPSFGSYFF
3D structure
PDB5b7b Structural Characterization of H1N1 Nucleoprotein-Nucleozin Binding Sites
ChainD
Resolution3.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 NUZ D Y289 N309 Y239 N259
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0005198 structural molecule activity
Biological Process
GO:0039689 negative stranded viral RNA replication
GO:0046718 symbiont entry into host cell
GO:0075732 viral penetration into host nucleus
Cellular Component
GO:0019013 viral nucleocapsid
GO:0019029 helical viral capsid
GO:0042025 host cell nucleus
GO:0043657 host cell
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5b7b, PDBe:5b7b, PDBj:5b7b
PDBsum5b7b
PubMed27404920
UniProtP15682|NCAP_I33A0 Nucleoprotein (Gene Name=NP)

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