Structure of PDB 5b1l Chain D

Receptor sequence
>5b1lD (length=93) Species: 10090 (Mus musculus) [Search protein sequence]
GRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIASEASRLA
HYNKRSTITSREVQTAVRLLLPGELAKHAVSEGTKAVTKYTSS
3D structure
PDB5b1l Testis-Specific Histone Variant H3t Gene Is Essential for Entry into Spermatogenesis
ChainD
Resolution2.35 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna D Y42 G53 I54 S55 S56 R86 S87 Y11 G22 I23 S24 S25 R55 S56
BS02 dna D R33 E35 S36 I39 Y40 R2 E4 S5 I8 Y9
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005694 chromosome

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:5b1l, PDBe:5b1l, PDBj:5b1l
PDBsum5b1l
PubMed28099840
UniProtQ9D2U9|H2B3A_MOUSE H2B.U histone 2 (Gene Name=H2bu2)

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