Structure of PDB 4zyj Chain D

Receptor sequence
>4zyjD (length=392) Species: 1950 (Streptomyces peucetius) [Search protein sequence]
GVLADNGLCEPKTPAGRRLLDLLERYLPALEAESRDNDREATLPVHLFDR
MRKEGVLGATVPEDLGGLGVHSLHDVALALARIAGRDAGVALALHMQFSR
GLTLDFEWRHGAPSTRPLAEDLLRQMGAGEAVICGAVKDVRGTTVLTRAD
GSYRLNGRKTLVSMAGIATHYVVSTRLEEAPVRLAAPVVARTTPGLTVLD
NWDGMGMRSSGSVDIVFDGCPVDRDRVLPRGEPGVRDDAALAGQTVSSIA
MLGIYVGIAEAARRIALTELRRRGGAPAGVRTTVAEIDARLFALHTAVAS
ALTTADRLADDLSGDLAARGRAMMTPFQYAKLLVNRHSVGVVDDCLMLVG
GAGYSNSHPLARLYRDVRAGGFMHPYNFTDGVDYLSEVALGR
3D structure
PDB4zyj Structure of DnmZ, a nitrososynthase in the Streptomyces peucetius anthracycline biosynthetic pathway.
ChainD
Resolution2.736 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) S260 E400
Catalytic site (residue number reindexed from 1) S247 E387
Enzyme Commision number 1.14.13.-
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 TYD D T113 F116 E117 R243 A253 A255 G256 Q257 R332 T103 F106 E107 R230 A240 A242 G243 Q244 R319
Gene Ontology
Molecular Function
GO:0003995 acyl-CoA dehydrogenase activity
GO:0004497 monooxygenase activity
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors
GO:0050660 flavin adenine dinucleotide binding
Biological Process
GO:0017000 antibiotic biosynthetic process

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Molecular Function

View graph for
Biological Process
External links
PDB RCSB:4zyj, PDBe:4zyj, PDBj:4zyj
PDBsum4zyj
PubMed26457508
UniProtA0A0R4I990|NITSS_STRPE Amino sugar nitrososynthase DnmZ (Gene Name=dnmZ)

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