Structure of PDB 4z78 Chain D

Receptor sequence
>4z78D (length=277) Species: 10090 (Mus musculus) [Search protein sequence]
MGPHSLRYFVTAVSRPGLGEPRFIAVGYVDDTQFVRFDSDADNPRFEPRA
PWMEQEGPEYWEEQTQRAKSDEQWFRVSLRTAQRYYNQSKGGSHTFQRMF
GCDVGSDWRLLRGYHQFAYDGRDYIALNEDLKTWTAADTAALITRRKWEQ
AGDAEYYRAYLEGECVEWLRRYLELGNETLLRTDSPKAHVTYHPRSQVDV
TLRCWALGFYPADITLTWQLNGEDLTQDMELVETRPAGDGTFQKWAAVVV
PLGKEQNYTCHVHHKGLPEPLTLRWKP
3D structure
PDB4z78 Distortion of the Major Histocompatibility Complex Class I Binding Groove to Accommodate an Insulin-derived 10-Mer Peptide.
ChainD
Resolution2.304 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 peptide D Y7 V9 Q63 R66 D70 W73 T80 R97 F99 Y123 T143 W147 D152 Y155 Y156 Y159 E163 W167 Y171 Y8 V10 Q64 R67 D71 W74 T81 R98 F100 Y124 T144 W148 D153 Y156 Y157 Y160 E164 W168 Y172
External links
PDB RCSB:4z78, PDBe:4z78, PDBj:4z78
PDBsum4z78
PubMed26085090
UniProtP01902|HA1D_MOUSE H-2 class I histocompatibility antigen, K-D alpha chain (Gene Name=H2-K1)

[Back to BioLiP]