Structure of PDB 4xru Chain D

Receptor sequence
>4xruD (length=287) Species: 553178 (Capnocytophaga gingivalis ATCC 33624) [Search protein sequence]
KNNTHHFPKLLILVGAPGSGKSTFARYFIRTEDNWVRVNRDDFRLMQFGD
SLMSPFYEERITKMVEASVIALLKNRTNVIIDATNSSLRSLQDMVHTYTE
YADISFKVFDLPVEELVKRQLQYTKEKFDFKPIPRALKETSLTYADQDTS
LPKAVICDLDGTLSLLNGRDPYNASTADQDLLNTPVAMVLKMAKQQGYKV
ILLSGRENAYREPTERFLAKYQIDYDLLLMRDTNDYRKDNIIKKELFLEE
IQGKYFVEFLLDDRNQVVDMWRRELALPCFQVNYGDF
3D structure
PDB4xru Reconstitution and structure of a bacterial Pnkp1-Rnl-Hen1 RNA repair complex.
ChainD
Resolution3.41 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) K24 D44 D183
Catalytic site (residue number reindexed from 1) K21 D41 D158
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MG D D183 D185 D288 D158 D160 D263
BS02 ATP D G23 K24 S25 T26 G20 K21 S22 T23
Gene Ontology
Molecular Function
GO:0047846 deoxynucleotide 3'-phosphatase activity

View graph for
Molecular Function
External links
PDB RCSB:4xru, PDBe:4xru, PDBj:4xru
PDBsum4xru
PubMed25882814
UniProtC2M8N3

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