Structure of PDB 4x10 Chain D

Receptor sequence
>4x10D (length=258) Species: 804310 (JC polyomavirus type 3) [Search protein sequence]
VEVLEVKTGVDSITEVECFLTPEMGDPDEHLRGFSKSISISDTFESDSPN
KDMLPCYSVARIPLPNLNILMWEAVTLKTEVIGVTTLMNVHSNGQATHDN
GAAKPVQGTSFHFFSVGGEALELQGVVFNYRTTYPDGTIFPKNATVQSQV
MNTEHKAYLDKNKAYPVECWVPDPTRNENTRYFGTLTGGENVPPVLHITN
TATTVLLDEFGVGPLCKGDNLYLSAVDVCGMFTNRSGSQQWRGLSRYFKV
QLRKRRVK
3D structure
PDB4x10 The Greater Affinity of JC Polyomavirus Capsid for alpha 2,6-Linked Lactoseries Tetrasaccharide c than for Other Sialylated Glycans Is a Major Determinant of Infectivity.
ChainD
Resolution1.9 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 SIA D L54 K59 S60 N264 S266 S268 Q270 L31 K36 S37 N234 S236 S238 Q240
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Cellular Component
GO:0019028 viral capsid

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:4x10, PDBe:4x10, PDBj:4x10
PDBsum4x10
PubMed25855729
UniProtP90498

[Back to BioLiP]