Structure of PDB 4wf9 Chain D

Receptor sequence
>4wf9D (length=160) Species: 93061 (Staphylococcus aureus subsp. aureus NCTC 8325) [Search protein sequence]
KEKFNTEVTENLMKKFNYSSVMEVPKIDKIVVNMGVGDAVQNSKVLDNAV
EEQKPLVTKAKKSIATFRLREGMPIGAKVTLRGERMYEFLDKLISVSLPR
VRDFQGVSKKAFDGRGNYTLGVKEQLIFPEIDYDKVSKVRGMDIVIVTTA
NTDEEARELL
3D structure
PDB4wf9 Structural insights into species-specific features of the ribosome from the pathogen Staphylococcus aureus.
ChainD
Resolution3.427 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna D M38 P65 T68 E81 Q115 D123 Y143 M34 P55 T58 E71 Q105 D113 Y133
BS02 rna D S24 M26 Q63 G86 S20 M22 Q53 G76
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:4wf9, PDBe:4wf9, PDBj:4wf9
PDBsum4wf9
PubMed26464510
UniProtQ2FW18|RL5_STAA8 Large ribosomal subunit protein uL5 (Gene Name=rplE)

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