Structure of PDB 4rtf Chain D

Receptor sequence
>4rtfD (length=349) Species: 83332 (Mycobacterium tuberculosis H37Rv) [Search protein sequence]
RAVGIDLGTTNSVVSVLEGGDPVVVANSEGSRTTPSIVAFARNGEVLVGQ
PAKNQAVTNVDRTVRSVKRHMGSDWSIEIDGKKYTAPEISARILMKLKRD
AEAYLGEDITDAVITTPAYFNDAQRQATKDAGQIAGLNVLRIVNEPTAAA
LAYGLDKKEQRILVFDLGGGTFDVSLLEIGGVVEVRATSGDNHLGGDDWD
QRVVDWLVDKFKGTSGIDLTKDKMAMQRLREAAEKAKIELSSSQSTSINL
PYITVDNPLFLDEQLTRAEFQRITQDLLDRTRKPFQSVIADTGISVSEID
HVVLVGGSTRMPAVTDLVKELTGGKEPNKGVNPDEVVAVGAALQAGVLK
3D structure
PDB4rtf Crystal structure of molecular chaperone DnaK from Mycobacterium tuberculosis H37Rv
ChainD
Resolution2.77 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ATP D G10 T11 K70 E147 D170 T175 G8 T9 K68 E145 D166 T171
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Thu Dec 19 11:33:26 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '4rtf', asym_id = 'D', title = 'Crystal structure of molecular chaperone DnaK from Mycobacterium tuberculosis H37Rv'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='4rtf', asym_id='D', title='Crystal structure of molecular chaperone DnaK from Mycobacterium tuberculosis H37Rv')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0005524,0006457,0051082,0140662', uniprot = '', pdbid = '4rtf', asym_id = 'D'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0005524,0006457,0051082,0140662', uniprot='', pdbid='4rtf', asym_id='D')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>