Structure of PDB 4riz Chain D

Receptor sequence
>4rizD (length=472) Species: 479434 (Sphaerobacter thermophilus DSM 20745) [Search protein sequence]
FLPATAFIDPEGRNRNEVERLVQQVVDLILAKLTGAAERPPMPETVDLPG
PITIPEAAATEATLLQAIRDMVDGSMNPANPGYIGHMDPMPATMAILGDL
VAAAVNNNMLSLEMSPSFSRLETLLLRAIAGLFGLGEQAGGVLTSGGSLA
NLQALAVARNVAFDSVEPGITGLAQRPVIFASEAAHTSLQKAAMLLGLGT
AAVIPVRATADSRMDPEDLRARIDQARGAGQHPFCVVATAGTTTTGNIDP
LAEIGAIAREHGLWFHVDAAYGGALVFSERHRWRLAGIEQADSITFNPQK
WLYVAKTCAMVLFRDAGVLERAFRIPAPQMRATDGFINLGEIGVQGTRHA
DVVKLWLTLQHIGQQGYARLIDDGYRLAERVVEGVRQRPFLRLAGEIDTN
IVCFRGEPDWLPAERWDDWNAALQALLLREGKIFLSLPVYRGGRWLRAVL
LNPYTTDAVIDAMFKQIDRFAG
3D structure
PDB4riz The crystal structure of y333q mutant pyridoxal-dependent decarboxylase from sphaerobacter thermophilus dsm 20745
ChainD
Resolution2.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 4.1.1.15: glutamate decarboxylase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 PMP D G150 G151 S152 H190 T247 D272 A274 N301 X304 G146 G147 S148 H186 T243 D268 A270 N297 X300
Gene Ontology
Molecular Function
GO:0016829 lyase activity
GO:0016830 carbon-carbon lyase activity
GO:0016831 carboxy-lyase activity
GO:0030170 pyridoxal phosphate binding
Biological Process
GO:0019752 carboxylic acid metabolic process
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:4riz, PDBe:4riz, PDBj:4riz
PDBsum4riz
PubMed
UniProtD1C7D8

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