Structure of PDB 4rht Chain D

Receptor sequence

>4rhtD (length=162) Species: 83332 (Mycobacterium tuberculosis H37Rv)

DIKSVLLTAEQIQARIAELGEQIGNDYQDLLLITVLKGAVLFVTDLARAI
PVPTQFEFMAVSSYGSSGVVRILKDLDRDIHGRDVLIVEDVVDSGLTLSW
LSRNLTSRNPRSLRVCTLLRKPDANVEIAYVGFDIPNDFVVGYGLDYDER
YRDLSYIGTLDP

3D structure

• PDB: 4rht First Crystal Structures of Mycobacterium tuberculosis 6-Oxopurine Phosphoribosyltransferase: Complexes with GMP and Pyrophosphate and with Acyclic Nucleoside Phosphonates Whose Prodrugs Have Antituberculosis Activity.
• Chain: D
• Resolution: 2.7633 Å

Enzymatic activity

• Catalytic site (original residue number in PDB): E122 D123 D126 F175 R188
• Catalytic site (residue number reindexed from 1): E89 D90 D93 F139 R152
• Enzyme Commision number: 2.4.2.8: hypoxanthine phosphoribosyltransferase.

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	POP	D	K66 G67 D182 R188	K37 G38 D146 R152
BS02	5GP	D	V176 D182	V140 D146
BS03	MG	D	E122 D123	E89 D90

Gene Ontology

Molecular Function

• GO:0000166 nucleotide binding
• GO:0000287 magnesium ion binding
• GO:0004422 hypoxanthine phosphoribosyltransferase activity
• GO:0016757 glycosyltransferase activity
• GO:0046872 metal ion binding
• GO:0052657 guanine phosphoribosyltransferase activity

Biological Process

• GO:0006166 purine ribonucleoside salvage
• GO:0006177 GMP biosynthetic process
• GO:0006178 guanine salvage
• GO:0006188 IMP biosynthetic process
• GO:0032263 GMP salvage
• GO:0032264 IMP salvage
• GO:0043101 purine-containing compound salvage
• GO:0046100 hypoxanthine metabolic process

Cellular Component

• GO:0005737 cytoplasm
• GO:0005829 cytosol

External links

• PDB: RCSB:4rht, PDBe:4rht, PDBj:4rht
• PDBsum: 4rht
• PubMed: 25915781
• UniProt: P9WHQ9|HGPRT_MYCTU Hypoxanthine-guanine phosphoribosyltransferase (Gene Name=hpt)