Structure of PDB 4r8p Chain D

Receptor sequence
>4r8pD (length=95) Species: 8355 (Xenopus laevis) [Search protein sequence]
KTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRL
AHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
3D structure
PDB4r8p Crystal structure of the PRC1 ubiquitylation module bound to the nucleosome.
ChainD
Resolution3.2846 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna D K31 Y42 I54 S55 S56 R86 S87 T88 K1 Y12 I24 S25 S26 R56 S57 T58
BS02 dna D R33 K34 E35 S36 I39 Y40 R3 K4 E5 S6 I9 Y10
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005694 chromosome

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Molecular Function
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Cellular Component
External links
PDB RCSB:4r8p, PDBe:4r8p, PDBj:4r8p
PDBsum4r8p
PubMed25355358
UniProtP02281|H2B11_XENLA Histone H2B 1.1

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