Structure of PDB 4qmg Chain D

Receptor sequence
>4qmgD (length=311) Species: 9606 (Homo sapiens) [Search protein sequence]
PTVQRGIIKMVLSGCAIIVRGQPRGGPPPERQINLSNIRAGNLARRAAAT
QPDAKDTPDEPWAFPAREFLRKKLIGKEVCFTIENKTPQGREYGMIYLGK
DTNGENIAESLVAEGLATRREGMRANNPEQNRLSECEEQAKAAKKGMWSE
GNGSHTIRDLKYTIENPRHFVDSHHQKPVNAIIEHVRDGSVVRALLLPDY
YLVTVMLSGIKCPTFRRETPEPFAAEAKFFTESRLLQRDVQIILESCHNQ
NILGTILHPNGNITELLLKEGFARCVDWSIAVYTRGAEKLRAAERFAKER
RLRIWRDYVAP
3D structure
PDB4qmg Structural Insights into the Tumor-Promoting Function of the MTDH-SND1 Complex.
ChainD
Resolution2.701 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.1.31.1: micrococcal nuclease.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide D G41 G42 P43 R87 K88 G92 K93 F244 A246 E247 F250 S254 R255 L256 R259 D260 H279 N281 R324 G25 G26 P27 R71 K72 G76 K77 F223 A225 E226 F229 S233 R234 L235 R238 D239 H258 N260 R303
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0004518 nuclease activity

View graph for
Molecular Function
External links
PDB RCSB:4qmg, PDBe:4qmg, PDBj:4qmg
PDBsum4qmg
PubMed25242325
UniProtQ7KZF4|SND1_HUMAN Staphylococcal nuclease domain-containing protein 1 (Gene Name=SND1)

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