Structure of PDB 4q86 Chain D

Receptor sequence
>4q86D (length=582) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
TQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDK
ECALCFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFV
HYPNEKWFPLTENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDR
GICGLPFTRQSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVF
ERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAEGFPIFAYDGSL
GGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDLD
VFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWNFSGT
TEEEFATLMAIFNKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWL
ANNSMGSHLRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLGL
ATGSDNGWYTLRIGELKAMLALAGGDLEQALVWTEWTMEFNSSVFSPERA
NYYRCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAVEAASAAMSGEAAFY
GLQPVDSDLHAFAAHQSLLKAYEKLQRAKAAF
3D structure
PDB4q86 Discovery of a new ATP-binding motif involved in peptidic azoline biosynthesis.
ChainD
Resolution2.25 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 AMP D K9 K61 A70 S71 G74 E75 E78 S184 A185 Q195 R286 K8 K60 A69 S70 G73 E74 E77 S183 A184 Q194 R285
BS02 MG D S215 L216 Y247 L334 K336 S214 L215 Y246 L333 K335
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0047693 ATP diphosphatase activity
Cellular Component
GO:0005829 cytosol

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Molecular Function
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Cellular Component
External links
PDB RCSB:4q86, PDBe:4q86, PDBj:4q86
PDBsum4q86
PubMed25129028
UniProtP75838|YCAO_ECOLI Ribosomal protein S12 methylthiotransferase accessory factor YcaO (Gene Name=ycaO)

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