Structure of PDB 4q85 Chain D

Receptor sequence
>4q85D (length=572) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
TQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDK
ECALCFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFV
HYPNEKWFPLTENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDR
GICGLPFTRQSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVF
ERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAEGFPIFAYDGSL
GGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLFTPPTFDDE
EVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLMA
IFNKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSHLR
ETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYT
LRIGELKAMLALAGGDLEQALVWTEWTMEFNSSVFSPERANYYRCLQTLL
LLAQEEDRQPLQYLNAFVRMYGADAVEAASAAMSGEAAFYGLQPVDSDLH
AFAAHQSLLKAYEKLQRAKAAF
3D structure
PDB4q85 Discovery of a new ATP-binding motif involved in peptidic azoline biosynthesis.
ChainD
Resolution3.29 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 APC D S16 K61 S71 E75 E78 S184 A185 N187 Q195 E199 R203 R286 S15 K60 S70 E74 E77 S183 A184 N186 Q194 E198 R202 R285
BS02 MG D L216 Y247 K336 L215 Y246 K325
BS03 MG D E202 E290 E201 E289
BS04 MG D E78 E199 E77 E198
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0047693 ATP diphosphatase activity
Cellular Component
GO:0005829 cytosol

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Molecular Function
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Cellular Component
External links
PDB RCSB:4q85, PDBe:4q85, PDBj:4q85
PDBsum4q85
PubMed25129028
UniProtP75838|YCAO_ECOLI Ribosomal protein S12 methylthiotransferase accessory factor YcaO (Gene Name=ycaO)

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